BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033D05LP1|AL429729
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1524 1812 0.0
>3x_Contig1524
Length = 11623
Score = 1812 bits (914), Expect = 0.0
Identities = 921/922 (99%), Gaps = 1/922 (0%)
Strand = Plus / Plus
Query: 1 gatcatagtactgctaattgtgacatgtcagtttctgaatccattgcgaagaccgctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3006 gatcatagtactgctaattgtgacatgtcagtttctgaatccattgcgaagaccgctcgt 3065
Query: 61 gcagccggcaatatattgaaaacgttaagtgatgaggaacgttcttccattctatataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3066 gcagccggcaatatattgaaaacgttaagtgatgaggaacgttcttccattctatataaa 3125
Query: 121 attcatgatggtttaaaggcgaatgcggcatctattgaggctgctaataaactagatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3126 attcatgatggtttaaaggcgaatgcggcatctattgaggctgctaataaactagatttg 3185
Query: 181 gaacaggctaaaagcactaatctttcggactctcttgtgaaaagattggatttgttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3186 gaacaggctaaaagcactaatctttcggactctcttgtgaaaagattggatttgttcaaa 3245
Query: 241 ggagataaatttgaaactatgctacaaggtattgttgatgttgccaatttgcaggatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3246 ggagataaatttgaaactatgctacaaggtattgttgatgttgccaatttgcaggatcct 3305
Query: 301 gttgggaaagtgaacttcgctagggaaattgatgagaatttgactttataccaaattact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3306 gttgggaaagtgaacttcgctagggaaattgatgagaatttgactttataccaaattact 3365
Query: 361 gccccagttggtgtattattggttattttcgaatcgagaccagaagtcattgccaatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3366 gccccagttggtgtattattggttattttcgaatcgagaccagaagtcattgccaatatt 3425
Query: 421 acagctttatccatcaaatcaggtaatgcagcaattttgaaaggtggtaaggaatccttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3426 acagctttatccatcaaatcaggtaatgcagcaattttgaaaggtggtaaggaatccttg 3485
Query: 481 aacacgttcaaagaaatgtcccgtatcgtgaatgacgtcgtcgagcaaaacgaaaagacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3486 aacacgttcaaagaaatgtcccgtatcgtgaatgacgtcgtcgagcaaaacgaaaagacg 3545
Query: 541 acccatgttccagttggtgccgttcagttgatcgaaaccagagaagatgtctctgacctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3546 acccatgttccagttggtgccgttcagttgatcgaaaccagagaagatgtctctgacctc 3605
Query: 601 ttgcaacaggatgaatatattgatttggttatccctcgtggttcaaatgccttagttaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3606 ttgcaacaggatgaatatattgatttggttatccctcgtggttcaaatgccttagttaga 3665
Query: 661 cagatcaaatcgtccaccaagattccagtgttaggtcatgcagacggtatttgttcaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3666 cagatcaaatcgtccaccaagattccagtgttaggtcatgcagacggtatttgttcaatc 3725
Query: 721 tacgtggacgaatctgccgatattggaaaggctaaaagaattcttgttgatgccaaaact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3726 tacgtggacgaatctgccgatattggaaaggctaaaagaattcttgttgatgccaaaact 3785
Query: 781 aactatccagctggttgtaacgctgtagaaactctactaatcaatcctaaattacagcac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3786 aactatccagctggttgtaacgctgtagaaactctactaatcaatcctaaattacagcac 3845
Query: 841 tggtgggaggtgctaaattctttaattgaaaatggtgt-actttgcatgtttcaaaagaa 899
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3846 tggtgggaggtgctaaattctttaattgaaaatggtgtaactttgcatgtttcaaaagaa 3905
Query: 900 gtaaagaagcaatataaggagc 921
||||||||||||||||||||||
Sbjct: 3906 gtaaagaagcaatataaggagc 3927
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7491
Number of Sequences: 1807
Number of extensions: 7491
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)